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  5. Brara.B00145.1

Brara.B00145.1


Description : 3-ketoacyl-CoA synthase *(KCS)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00145.1
Cluster HCAA Clusters: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
At3g52160 No alias 3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VHW8] 0.03 Orthogroups_2024-Update
At4g34520 No alias 3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UUK5] 0.04 Orthogroups_2024-Update
Bradi1g68430 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
Bradi1g69637 No alias 3-ketoacyl-CoA synthase 6 0.03 Orthogroups_2024-Update
Bradi1g72560 No alias 3-ketoacyl-CoA synthase 10 0.03 Orthogroups_2024-Update
Glyma.08G261100 No alias 3-ketoacyl-CoA synthase 6 0.03 Orthogroups_2024-Update
HORVU4Hr1G067340.2 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
LOC_Os01g34560 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g12030 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00008960-RA No alias (at2g26640 : 707.0) Encodes KCS11, a member of the... 0.04 Orthogroups_2024-Update
Potri.008G160000 No alias 3-ketoacyl-CoA synthase 11 0.03 Orthogroups_2024-Update
Potri.009G116700 No alias 3-ketoacyl-CoA synthase 4 0.05 Orthogroups_2024-Update
Potri.014G104300 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
Pp1s8_88V6 No alias beta-ketoacyl- synthase 0.03 Orthogroups_2024-Update
Solyc06g053900 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** K4C677_SOLLC) 0.03 Orthogroups_2024-Update
Sopen05g005020 No alias FAE1/Type III polyketide synthase-like protein 0.03 Orthogroups_2024-Update
Sopen08g021340 No alias FAE1/Type III polyketide synthase-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 27 316
IPR012328 Chalcone/stilbene_synth_C 339 398
No external refs found!