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  5. Brara.B00163.1

Brara.B00163.1


Description : component *(MED26) of MEDIATOR transcription co-activator complex


Gene families : OG_42_0001427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001427_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00163.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
404483 No alias Transcription elongation factor (TFIIS) family protein 0.03 Orthogroups_2024-Update
Brara.E02985.1 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.03 Orthogroups_2024-Update
Glyma.02G157800 No alias Transcription elongation factor (TFIIS) family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G064830.4 No alias component *(MED26) of MEDIATOR transcription co-activator complex 0.02 Orthogroups_2024-Update
Solyc10g078350 No alias Transcription elongation factor (TFIIS) family protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR017923 TFIIS_N 139 187
No external refs found!