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  5. Brara.B00211.1

Brara.B00211.1


Description : subfamily ABCG transporter


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00211.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G086800 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.10G205600 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.16G110100 No alias ATP-binding cassette 14 0.03 Orthogroups_2024-Update
PSME_00045465-RA No alias (at1g31770 : 752.0) ATP-binding cassette 14 (ABCG14);... 0.02 Orthogroups_2024-Update
Potri.019G083000 No alias ATP-binding casette family G25 0.03 Orthogroups_2024-Update
Pp1s65_100V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.8G055700.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Solyc01g006720 No alias ABC transporter family protein (AHRD V3.3 *** B9IIG9_POPTR) 0.03 Orthogroups_2024-Update
Solyc04g070970 No alias ABC transporter family protein (AHRD V3.3 *** B9IIG9_POPTR) 0.03 Orthogroups_2024-Update
evm.model.contig_2112.2 No alias (at5g06530 : 343.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update
evm.model.contig_2187.6 No alias (at5g06530 : 360.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update
evm.model.tig00020685.31 No alias (at5g06530 : 184.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update
evm.model.tig00021582.39 No alias (at5g06530 : 263.0) ABC-2 type transporter family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 500 708
IPR003439 ABC_transporter-like 180 331
No external refs found!