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Description : pectin methylesterase
Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.B00244.1 | |
| Cluster | HCAA Clusters: Cluster_394 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_15905 | No alias | putative pectinesterase 8 | 0.03 | Orthogroups_2024-Update | |
| A4A49_32955 | No alias | putative pectinesterase 53 | 0.03 | Orthogroups_2024-Update | |
| At1g11590 | No alias | Probable pectinesterase/pectinesterase inhibitor 19... | 0.03 | Orthogroups_2024-Update | |
| At2g21610 | No alias | Pectinesterase 11 [Source:UniProtKB/TrEMBL;Acc:A0A1P8AZ45] | 0.03 | Orthogroups_2024-Update | |
| At2g47280 | No alias | Probable pectinesterase 66... | 0.03 | Orthogroups_2024-Update | |
| At5g18990 | No alias | Probable pectinesterase 55... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g21810 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi2g11470 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A02274.1 | No alias | pectin methylesterase | 0.03 | Orthogroups_2024-Update | |
| Brara.C03630.1 | No alias | pectin methylesterase | 0.02 | Orthogroups_2024-Update | |
| Brara.F03540.1 | No alias | pectin methylesterase | 0.05 | Orthogroups_2024-Update | |
| Brara.I00335.1 | No alias | pectin methylesterase | 0.03 | Orthogroups_2024-Update | |
| Brara.J02514.1 | No alias | pectin methylesterase | 0.04 | Orthogroups_2024-Update | |
| Glyma.01G068100 | No alias | Pectin lyase-like superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.02G294700 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G125100 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G025500 | No alias | pectin methylesterase 31 | 0.03 | Orthogroups_2024-Update | |
| MA_6149868g0010 | No alias | (at2g36710 : 275.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
| MA_62865g0010 | No alias | (at2g36710 : 276.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
| Mp1g00190.1 | No alias | pectin methylesterase | 0.02 | Orthogroups_2024-Update | |
| Potri.001G364200 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.004G033700 | No alias | Pectin lyase-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.008G104800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.014G117100 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Pp1s215_36V6 | No alias | pectin methylesterase | 0.03 | Orthogroups_2024-Update | |
| Pp1s236_72V6 | No alias | pectin methylesterase | 0.02 | Orthogroups_2024-Update | |
| Pp1s23_141V6 | No alias | pectin methylesterase | 0.02 | Orthogroups_2024-Update | |
| Seita.5G027700.1 | No alias | pectin methylesterase | 0.03 | Orthogroups_2024-Update | |
| Seita.5G313900.1 | No alias | pectin methylesterase | 0.04 | Orthogroups_2024-Update | |
| Sobic.008G131300.1 | No alias | pectin methylesterase | 0.02 | Orthogroups_2024-Update | |
| Solyc07g065360 | No alias | Pectinesterase (AHRD V3.3 *** K4CHL4_SOLLC) | 0.02 | Orthogroups_2024-Update | |
| Sopen07g022810 | No alias | Pectinesterase | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030599 | pectinesterase activity | IEA | 16Dec |
| BP | GO:0042545 | cell wall modification | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Predicted GO |
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
| BP | GO:0010215 | cellulose microfibril organization | IEP | Predicted GO |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| BP | GO:0030198 | extracellular matrix organization | IEP | Predicted GO |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0030570 | pectate lyase activity | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| BP | GO:0032200 | telomere organization | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| BP | GO:0043062 | extracellular structure organization | IEP | Predicted GO |
| BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Predicted GO |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000070 | Pectinesterase_cat | 67 | 351 |
| No external refs found! |