Brara.B00253.1

Description : subgroup ERF-IX transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B00253.1
Cluster	HCAA Clusters: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
73155	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.03	Orthogroups_2024-Update
A4A49_03629	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_24041	No alias	ethylene-responsive transcription factor 1a	0.03	Orthogroups_2024-Update
At1g19210	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Orthogroups_2024-Update
At5g61590	No alias	Ethylene-responsive transcription factor ERF107...	0.03	Orthogroups_2024-Update
Bradi5g17640	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.C01524.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.H02380.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.I00546.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.I04678.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.J00757.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
GRMZM2G055204	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
GRMZM2G103085	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G124011	No alias	dehydration response element B1A	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
GRMZM2G466044	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
GRMZM2G481668	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.02G080200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.05G092800	No alias	cooperatively regulated by ethylene and jasmonate 1	0.03	Orthogroups_2024-Update
Glyma.10G119100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.10G194200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.18G252400	No alias	ethylene-responsive element binding factor 13	0.04	Orthogroups_2024-Update
HORVU2Hr1G098330.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os07g47790	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_3405g0010	No alias	(q40476\|erf1_tobac : 120.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_83118g0010	No alias	(at1g78080 : 90.5) Encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_97319g0010	No alias	(at3g16280 : 127.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_9785986g0010	No alias	(at5g21960 : 130.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00004892-RA	No alias	(at1g19210 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00007051-RA	No alias	(at1g74930 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00050134-RA	No alias	(at5g19790 : 92.0) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00057236-RA	No alias	(at5g11590 : 147.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.002G065600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.003G079300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G150800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.005G195000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.005G219600	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Potri.006G138800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G090600	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.05	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.05	Orthogroups_2024-Update
Potri.014G047000	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.018G021900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.05	Orthogroups_2024-Update
Pp1s117_32V6	No alias	ap2 domain transcription factor	0.03	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Seita.2G269600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G191900.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G298100.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.05	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G240500.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.007G181500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc07g054220	No alias	Ethylene-responsive transcription factor ERF053 (AHRD...	0.03	Orthogroups_2024-Update
Solyc09g089930	No alias	ethylene responsive factor E.2	0.03	Orthogroups_2024-Update
Sopen02g033000	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen04g027740	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen05g030600	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g022520	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000775	chromosome, centromeric region	IEP	Predicted GO
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
BP	GO:0006528	asparagine metabolic process	IEP	Predicted GO
BP	GO:0006529	asparagine biosynthetic process	IEP	Predicted GO
BP	GO:0007059	chromosome segregation	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
BP	GO:0022402	cell cycle process	IEP	Predicted GO
BP	GO:0045132	meiotic chromosome segregation	IEP	Predicted GO
CC	GO:0098687	chromosomal region	IEP	Predicted GO
BP	GO:0098813	nuclear chromosome segregation	IEP	Predicted GO
BP	GO:1903046	meiotic cell cycle process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	80	130

External Links

No external refs found!

Brara.B00253.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation