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  5. Brara.B00260.1

Brara.B00260.1


Description : group-II formin actin filament elongation factor


Gene families : OG_42_0000436 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00260.1
Cluster HCAA Clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
A4A49_23525 No alias formin-like protein 20 0.02 Orthogroups_2024-Update
LOC_Os10g02980 No alias formin, putative, expressed 0.03 Orthogroups_2024-Update
Seita.1G350100.1 No alias group-II formin actin filament elongation factor 0.02 Orthogroups_2024-Update
Seita.6G105700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G362800.1 No alias group-II formin actin filament elongation factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 1107 1475
IPR014020 Tensin_C2-dom 200 337
No external refs found!