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  5. Brara.B00281.1

Brara.B00281.1


Description : circadian clock repression factor *(CHE) & TCP-type transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00281.1
Cluster HCAA Clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
A4A49_39012 No alias transcription factor tcp8 0.03 Orthogroups_2024-Update
At3g47620 No alias Transcription factor TCP14... 0.04 Orthogroups_2024-Update
Brara.F03236.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.03 Orthogroups_2024-Update
Glyma.01G045500 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G284500 No alias TCP family transcription factor 0.05 Orthogroups_2024-Update
Glyma.10G240200 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Glyma.12G168300 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g12230 No alias TCP-domain protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_2101g0010 No alias (at1g58100 : 136.0) TCP family transcription factor ;... 0.03 Orthogroups_2024-Update
Seita.1G376200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.004G225400.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.02 Orthogroups_2024-Update
Solyc06g065190 No alias TCP transcription factor 13 0.03 Orthogroups_2024-Update
Sopen06g023690 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006743 ubiquinone metabolic process IEP Predicted GO
BP GO:0006744 ubiquinone biosynthetic process IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predicted GO
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042181 ketone biosynthetic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:1901661 quinone metabolic process IEP Predicted GO
BP GO:1901663 quinone biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 27 156
No external refs found!