1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B00454.1

Brara.B00454.1


Description : Unknown function


Gene families : OG_42_0001181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00454.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At5g12340 No alias DUF4228 domain protein [Source:UniProtKB/TrEMBL;Acc:Q1PDX4] 0.05 Orthogroups_2024-Update
Bradi2g26817 No alias Function unknown 0.02 Orthogroups_2024-Update
Brara.C03896.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I02965.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G301500 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.08G301600 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU7Hr1G083850.3 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_374419g0010 No alias (at1g28190 : 124.0) unknown protein; BEST Arabidopsis... 0.03 Orthogroups_2024-Update
MA_5824616g0010 No alias (at1g28190 : 113.0) unknown protein; BEST Arabidopsis... 0.04 Orthogroups_2024-Update
MA_88642g0010 No alias (at1g28190 : 133.0) unknown protein; BEST Arabidopsis... 0.03 Orthogroups_2024-Update
Sobic.003G428700.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 17 203
No external refs found!