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  5. Brara.B00461.1

Brara.B00461.1


Description : MYB class-R2R3 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00461.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
At3g01140 No alias Myb domain protein 106 [Source:UniProtKB/TrEMBL;Acc:F4J2A8] 0.05 Orthogroups_2024-Update
At4g34990 No alias Transcription factor MYB32... 0.03 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Brara.G00519.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00690.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Glyma.03G225200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
Glyma.10G014600 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.18G261400 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
LOC_Os01g65370 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
Mp3g23170.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Potri.008G101400 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Seita.6G239700.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G275500.3 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sopen01g034190 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 72 115
IPR001005 SANT/Myb 19 66
No external refs found!