Brara.B00561.1

Description : de novo DNA methylase *(DRM) & EC_2.1 transferase transferring one-carbon group

Gene families : OG_42_0001159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B00561.1
Cluster	HCAA Clusters: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
At5g15380	No alias	DNA (cytosine-5)-methyltransferase DRM1...	0.03	Orthogroups_2024-Update
LOC_Os05g04330	No alias	DNA methyltransferase protein, putative, expressed	0.02	Orthogroups_2024-Update
Potri.014G049500	No alias	domains rearranged methyltransferase 2	0.03	Orthogroups_2024-Update
Solyc05g053270	No alias	DNA (Cytosine-5-)-methyltransferase (AHRD V3.3 -...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	16Dec
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0048364	root development	IEP	Predicted GO
BP	GO:0048367	shoot system development	IEP	Predicted GO
BP	GO:0048731	system development	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
BP	GO:0099402	plant organ development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001525	C5_MeTfrase	279	393

External Links

No external refs found!