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  5. Brara.B00580.1

Brara.B00580.1


Description : Unknown function


Gene families : OG_42_0000201 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00580.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
A4A49_18198 No alias caffeoylshikimate esterase 0.03 Orthogroups_2024-Update
Bradi2g54367 No alias alpha/beta-Hydrolases superfamily protein 0.04 Orthogroups_2024-Update
Brara.D02388.1 No alias monoacylglycerol lipase 0.03 Orthogroups_2024-Update
Glyma.01G080600 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G184000 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G086980.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os07g37840 No alias lipase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00024358-RA No alias (at2g39420 : 390.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
PSME_00030334-RA No alias (at2g39420 : 399.0) alpha/beta-Hydrolases superfamily... 0.02 Orthogroups_2024-Update
PSME_00035352-RA No alias (at3g55180 : 299.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
Potri.001G466700 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
CC GO:0000124 SAGA complex IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051254 positive regulation of RNA metabolic process IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022742 Hydrolase_4 55 298
No external refs found!