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  5. Brara.B00602.1

Brara.B00602.1


Description : organellar chaperone *(Clp-p/Clp-m)


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00602.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
At5g15450 No alias Chaperone protein ClpB3, chloroplastic... 0.05 Orthogroups_2024-Update
Brara.C01504.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Brara.J01953.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.05 Orthogroups_2024-Update
HORVU7Hr1G009000.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_31115g0010 No alias (at5g51070 : 894.0) ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update
MA_596288g0010 No alias (at5g50920 : 437.0) Encodes a protein that is similar to... 0.03 Orthogroups_2024-Update
Mp1g16450.1 No alias cytosolic chaperone (Hsp101) 0.04 Orthogroups_2024-Update
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.02 Orthogroups_2024-Update
PSME_00023897-RA No alias (at5g50920 : 343.0) Encodes a protein that is similar to... 0.03 Orthogroups_2024-Update
Potri.015G110000 No alias Clp ATPase 0.03 Orthogroups_2024-Update
Pp1s3_208V6 No alias atp-dependent clp protease 0.02 Orthogroups_2024-Update
Seita.1G177700.1 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Seita.3G175700.1 No alias cytosolic chaperone *(Hsp101) 0.04 Orthogroups_2024-Update
Sopen03g036850 No alias AAA domain (Cdc48 subfamily) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 275 407
IPR003959 ATPase_AAA_core 672 839
IPR019489 Clp_ATPase_C 846 924
IPR004176 Clp_N 91 140
IPR004176 Clp_N 166 217
No external refs found!