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  5. Brara.B00610.1

Brara.B00610.1


Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00610.1
Cluster HCAA Clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
A4A49_19523 No alias cobra-like protein 4 0.05 Orthogroups_2024-Update
Bradi1g08310 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Bradi1g22030 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Bradi1g59880 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.05 Orthogroups_2024-Update
Brara.C04212.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
Brara.E03592.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
Glyma.02G196100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Glyma.04G160100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.06G205400 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
LOC_Os05g32110 No alias COBRA, putative, expressed 0.03 Orthogroups_2024-Update
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Orthogroups_2024-Update
PSME_00041222-RA No alias (q60e70|cobl3_orysa : 636.0) COBRA-like 3 protein... 0.03 Orthogroups_2024-Update
Potri.015G060000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Potri.015G060100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.08 Orthogroups_2024-Update
Potri.017G098600 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Sobic.001G086200.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Solyc02g065770 No alias COBRA protein (AHRD V3.3 *** K4B708_SOLLC) 0.03 Orthogroups_2024-Update
Sopen02g033910 No alias COBRA-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!