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  5. Brara.B00650.1

Brara.B00650.1


Description : Unknown function


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00650.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
At1g65880 No alias Benzoate--CoA ligase, peroxisomal... 0.03 Orthogroups_2024-Update
Bradi1g64640 No alias acyl-activating enzyme 7 0.03 Orthogroups_2024-Update
GRMZM2G013783 No alias acyl-activating enzyme 7 0.02 Orthogroups_2024-Update
Glyma.02G042200 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Glyma.07G242100 No alias acyl-activating enzyme 7 0.03 Orthogroups_2024-Update
Glyma.11G014900 No alias acyl activating enzyme 1 0.05 Orthogroups_2024-Update
Glyma.14G208200 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G120150.9 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g02700 No alias AMP-binding enzyme, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g03790 No alias AMP-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_3754g0010 No alias (at5g16370 : 413.0) acyl activating enzyme 5 (AAE5);... 0.03 Orthogroups_2024-Update
PSME_00057252-RA No alias (at1g65880 : 600.0) Encodes a benzoate-CoA ligase.... 0.02 Orthogroups_2024-Update
Potri.002G010600 No alias acyl activating enzyme 1 0.04 Orthogroups_2024-Update
Seita.9G550600.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc02g081360 No alias CoA ligase (AHRD V3.3 *** A0A0K9NMT8_ZOSMR) 0.04 Orthogroups_2024-Update
Solyc06g008920 No alias AMP dependent ligase, putative (AHRD V3.3 *** B9R8M5_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 435 512
IPR000873 AMP-dep_Synth/Lig 21 426
No external refs found!