1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B00699.1

Brara.B00699.1


Description : phytoene synthase *(PSY) & EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG_42_0001912 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001912_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00699.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_15187 No alias bifunctional 15-cis-phytoene synthase, chromoplastic 0.04 Orthogroups_2024-Update
A4A49_17569 No alias bifunctional 15-cis-phytoene synthase, chromoplastic 0.03 Orthogroups_2024-Update
Bradi1g29590 No alias PHYTOENE SYNTHASE 0.02 Orthogroups_2024-Update
Glyma.14G209700 No alias PHYTOENE SYNTHASE 0.03 Orthogroups_2024-Update
HORVU5Hr1G005740.2 No alias phytoene synthase *(PSY) & EC_2.5 transferase... 0.03 Orthogroups_2024-Update
LOC_Os12g43130 No alias phytoene synthase, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
Sopen02g025960 No alias Squalene/phytoene synthase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0031082 BLOC complex IEP Predicted GO
CC GO:0031083 BLOC-1 complex IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002060 Squ/phyt_synthse 139 394
No external refs found!