1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B00704.1

Brara.B00704.1


Description : transcription factor *(REVEILLE)


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00704.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
A4A49_11843 No alias protein reveille 6 0.03 Orthogroups_2024-Update
A4A49_37597 No alias protein reveille 1 0.03 Orthogroups_2024-Update
At1g01520 No alias ASG4 [Source:UniProtKB/TrEMBL;Acc:A0A178W835] 0.05 Orthogroups_2024-Update
At5g02840 No alias LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] 0.04 Orthogroups_2024-Update
At5g17300 No alias Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6] 0.03 Orthogroups_2024-Update
At5g52660 No alias Protein REVEILLE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8H0W3] 0.03 Orthogroups_2024-Update
Bradi1g29680 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g32330 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g34842 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g51757 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.C00086.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.07 Orthogroups_2024-Update
Brara.C00761.1 No alias transcription factor *(REVEILLE) 0.05 Orthogroups_2024-Update
Brara.E01373.1 No alias transcription factor *(REVEILLE) 0.06 Orthogroups_2024-Update
Brara.I00054.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Brara.J00041.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.05 Orthogroups_2024-Update
Cre12.g514400 No alias circadian clock associated 1 0.01 Orthogroups_2024-Update
GRMZM2G029850 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G145041 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G170322 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G048500 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.13G136300 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G217700 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G025030.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
LOC_Os02g45670 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g49450 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.02 Orthogroups_2024-Update
PSME_00043429-RA No alias (at5g17300 : 121.0) Myb-like transcription factor that... 0.02 Orthogroups_2024-Update
Potri.004G074300 No alias Homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Potri.015G030400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s96_165V6 No alias lhy protein 0.02 Orthogroups_2024-Update
Sobic.001G143100.2 No alias transcription factor *(REVEILLE) 0.02 Orthogroups_2024-Update
Sobic.004G279300.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Sobic.010G004300.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Sobic.010G223700.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Solyc10g084370 No alias MYB transcription factor (AHRD V3.3 *** B5TV64_CAMSI) 0.03 Orthogroups_2024-Update
Sopen02g011740 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 46 89
No external refs found!