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  5. Brara.B00729.1

Brara.B00729.1


Description : Unknown function


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00729.1
Cluster HCAA Clusters: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
A4A49_32189 No alias protein hyper-sensitivity-related 4 0.05 Orthogroups_2024-Update
Bradi1g54760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Brara.C00779.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03143.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.13G096200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Glyma.18G254100 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
LOC_Os03g58790 No alias ATPase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435321g0020 No alias (at5g57480 : 572.0) P-loop containing nucleoside... 0.04 Orthogroups_2024-Update
MA_16312g0010 No alias (at5g40010 : 192.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
MA_296237g0010 No alias (at5g57480 : 91.7) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
PSME_00046806-RA No alias (at3g28580 : 407.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
Potri.008G177200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Seita.3G407400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G051600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G067000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G191300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen05g010290 No alias ATPase family associated with various cellular activities (AAA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 240 372
IPR025753 AAA_N_dom 35 128
No external refs found!