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  5. Brara.B00736.1

Brara.B00736.1


Description : Unknown function


Gene families : OG_42_0001484 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001484_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00736.1
Cluster HCAA Clusters: Cluster_401

Target Alias Description ECC score Gene Family Method Actions
At2g04840 No alias F-box only protein (DUF295) [Source:UniProtKB/TrEMBL;Acc:Q9SJ75] 0.02 Orthogroups_2024-Update
At2g24080 No alias F-box protein (DUF295) [Source:UniProtKB/TrEMBL;Acc:O82236] 0.03 Orthogroups_2024-Update
At4g10820 No alias F-box family protein [Source:UniProtKB/TrEMBL;Acc:Q9SN66] 0.03 Orthogroups_2024-Update
At5g25290 No alias F-box protein At5g25290 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSE7] 0.04 Orthogroups_2024-Update
Brara.C04591.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR005174 DUF295 312 359
IPR001810 F-box_dom 16 55
No external refs found!