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  5. Brara.B00773.1

Brara.B00773.1


Description : Unknown function


Gene families : OG_42_0008823 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008823_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00773.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
MA_130339g0010 No alias (at3g53700 : 230.0) maternal effect embryo arrest 40... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 336 383
IPR002885 Pentatricopeptide_repeat 229 279
IPR002885 Pentatricopeptide_repeat 190 222
IPR002885 Pentatricopeptide_repeat 406 433
IPR002885 Pentatricopeptide_repeat 296 327
No external refs found!