1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B00841.1

Brara.B00841.1


Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer


Gene families : OG_42_0000484 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00841.1
Cluster HCAA Clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_65840 No alias tubulin alpha chain 0.02 Orthogroups_2024-Update
At1g04820 No alias Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:B9DGT7] 0.03 Orthogroups_2024-Update
GRMZM2G152466 No alias Tubulin/FtsZ family protein 0.03 Orthogroups_2024-Update
Glyma.05G157300 No alias tubulin alpha-5 0.03 Orthogroups_2024-Update
Glyma.10G255500 No alias tubulin alpha-2 chain 0.03 Orthogroups_2024-Update
LOC_Os07g38730 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
MA_184192g0010 No alias (q6vaf9|tba4_goshi : 795.0) Tubulin alpha-4 chain... 0.03 Orthogroups_2024-Update
PSME_00048529-RA No alias (q6vaf9|tba4_goshi : 837.0) Tubulin alpha-4 chain... 0.03 Orthogroups_2024-Update
Potri.003G220300 No alias tubulin alpha-3 0.04 Orthogroups_2024-Update
Pp1s70_210V6 No alias alpha tubulin 1 0.02 Orthogroups_2024-Update
Seita.9G110400.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Sobic.001G453700.1 No alias alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Sopen00g003710 No alias Tubulin/FtsZ family, GTPase domain 0.04 Orthogroups_2024-Update
evm.model.contig_448.6 No alias (q6vag0|tba2_goshi : 681.0) Tubulin alpha-2 chain... 0.01 Orthogroups_2024-Update
evm.model.tig00000237.34 No alias (q9zrj4|tba_chlvu : 777.0) Tubulin alpha chain -... 0.02 Orthogroups_2024-Update
evm.model.tig00000404.34 No alias (q9zrj4|tba_chlvu : 793.0) Tubulin alpha chain -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 7 135
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 185 314
No external refs found!