1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B00844.1

Brara.B00844.1


Description : transcription factor *(ERN1) & subgroup ERF-V transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00844.1
Cluster HCAA Clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
104980 No alias related to AP2 4 0.02 Orthogroups_2024-Update
A4A49_06467 No alias ethylene-responsive transcription factor crf4 0.04 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.03 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_21566 No alias ethylene-responsive transcription factor erf087 0.03 Orthogroups_2024-Update
A4A49_35008 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
A4A49_38622 No alias dehydration-responsive element-binding protein 3 0.03 Orthogroups_2024-Update
A4A49_39806 No alias ethylene-responsive transcription factor erf119 0.03 Orthogroups_2024-Update
A4A49_40581 No alias ethylene-responsive transcription factor erf106 0.04 Orthogroups_2024-Update
At1g12610 No alias Dehydration-responsive element-binding protein 1F... 0.04 Orthogroups_2024-Update
At1g28160 No alias Ethylene-responsive transcription factor ERF087... 0.04 Orthogroups_2024-Update
At2g33710 No alias Integrase-type DNA-binding superfamily protein... 0.03 Orthogroups_2024-Update
At2g40220 No alias Ethylene-responsive transcription factor ABI4... 0.05 Orthogroups_2024-Update
At5g43410 No alias Ethylene-responsive transcription factor ERF096... 0.03 Orthogroups_2024-Update
At5g47230 No alias ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9] 0.04 Orthogroups_2024-Update
At5g51990 No alias C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26] 0.03 Orthogroups_2024-Update
Bradi4g29010 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g17640 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Brara.A01860.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.C01524.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.03 Orthogroups_2024-Update
Brara.C03348.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.E02619.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.G00808.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Brara.H01496.1 No alias subgroup ERF-I transcription factor 0.06 Orthogroups_2024-Update
Brara.I00797.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Brara.I03370.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.I04678.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Brara.I05105.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.J00612.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.J02251.1 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
GRMZM2G016434 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G066158 No alias ERF domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G137341 No alias C-repeat/DRE binding factor 2 0.02 Orthogroups_2024-Update
GRMZM2G466044 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
GRMZM5G837876 No alias ethylene-responsive element binding factor 15 0.02 Orthogroups_2024-Update
Glyma.03G112000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.03G112800 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.05G049900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G028300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G027000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G137600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G202300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G016500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.13G088100 No alias related to AP2 4 0.02 Orthogroups_2024-Update
Glyma.13G355700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G164800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G145400 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Glyma.17G194100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G164100 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.20G031000 No alias related to AP2 11 0.02 Orthogroups_2024-Update
HORVU1Hr1G077680.2 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G071270.4 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G015350.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G090800.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
LOC_Os06g09810 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10343854g0010 No alias (at1g74930 : 110.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_10433310g0010 No alias (at5g11590 : 108.0) encodes a member of the DREB... 0.06 Orthogroups_2024-Update
MA_10435354g0010 No alias (at1g19210 : 88.6) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_116185g0010 No alias (at5g61600 : 90.9) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
MA_12171g0010 No alias (at5g21960 : 119.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_201698g0010 No alias (at5g11590 : 124.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_20987g0010 No alias (at2g35700 : 127.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_4032g0010 No alias (q9sxs8|erf3_tobac : 85.1) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_40338g0010 No alias (at1g21910 : 84.7) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_69434g0020 No alias (q40479|erf2_tobac : 84.0) Ethylene-responsive... 0.04 Orthogroups_2024-Update
MA_9304g0020 No alias (at1g28360 : 87.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_97319g0010 No alias (at3g16280 : 127.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037661-RA No alias (at4g17500 : 149.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00050761-RA No alias (at1g15360 : 129.0) Encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.002G124000 No alias related to AP2 1 0.03 Orthogroups_2024-Update
Potri.003G071666 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Potri.008G091300 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
Potri.011G056900 No alias ERF domain protein 12 0.03 Orthogroups_2024-Update
Potri.012G134000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.014G055700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G126100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.016G126100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Potri.T050600 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s296_32V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s31_112V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G259200.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.1G270800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G341100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G031600.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.4G180800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.5G320400.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.7G080300.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Seita.7G262800.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Seita.9G500100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G296300.1 No alias subgroup ERF-IX transcription factor 0.05 Orthogroups_2024-Update
Sobic.002G081300.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Sobic.003G297600.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G442100.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G051200.2 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G087600.2 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G058732.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G210300.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G259000.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G077001.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.007G077100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G077200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G077300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.009G184400.1 No alias subgroup ERF-VIII transcription factor 0.05 Orthogroups_2024-Update
Solyc01g090560 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc02g090800 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc03g026270 No alias CBF 0.03 Orthogroups_2024-Update
Solyc03g124110 No alias CBF 0.03 Orthogroups_2024-Update
Solyc05g013540 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc09g066360 No alias Ethylene Response Factor C.3 0.04 Orthogroups_2024-Update
Sopen02g022270 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen03g041270 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen07g024840 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 24 74
No external refs found!