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  5. Brara.B00911.1

Brara.B00911.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000342 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00911.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
236210 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update
A4A49_31586 No alias glucan endo-1,3-beta-glucosidase 8 0.03 Orthogroups_2024-Update
GRMZM2G097207 No alias O-Glycosyl hydrolases family 17 protein 0.02 Orthogroups_2024-Update
Potri.018G000900 No alias O-Glycosyl hydrolases family 17 protein 0.04 Orthogroups_2024-Update
Sopen04g007230 No alias Glycosyl hydrolases family 17 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012946 X8 372 440
IPR000490 Glyco_hydro_17 26 351
No external refs found!