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  5. Brara.B00913.1

Brara.B00913.1


Description : subunit beta *(CCT2) of CCT chaperonin folding complex


Gene families : OG_42_0004464 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00913.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
171093 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
At5g20890 No alias T-complex protein 1 subunit beta... 0.03 Orthogroups_2024-Update
Bradi2g16500 No alias TCP-1/cpn60 chaperonin family protein 0.06 Orthogroups_2024-Update
Cre09.g416750 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Glyma.11G185500 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Glyma.12G087300 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G068820.1 No alias subunit beta *(CCT2) of CCT chaperonin folding complex 0.12 Orthogroups_2024-Update
HORVU5Hr1G085530.1 No alias subunit beta *(CCT2) of CCT chaperonin folding complex 0.09 Orthogroups_2024-Update
Kfl00618_0060 kfl00618_0060_v1.1 (at5g20890 : 796.0) TCP-1/cpn60 chaperonin family... 0.02 Orthogroups_2024-Update
LOC_Os03g42220 No alias T-complex protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434959g0010 No alias (at5g20890 : 892.0) TCP-1/cpn60 chaperonin family... 0.03 Orthogroups_2024-Update
Mp5g16030.1 No alias CCT2 subunit beta of CCT chaperonin folding complex 0.02 Orthogroups_2024-Update
Potri.001G341100 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Seita.5G061900.1 No alias subunit beta *(CCT2) of CCT chaperonin folding complex 0.05 Orthogroups_2024-Update
Sobic.003G112800.1 No alias subunit beta *(CCT2) of CCT chaperonin folding complex 0.13 Orthogroups_2024-Update
Sopen11g027710 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
evm.model.tig00020903.30 No alias (at5g20890 : 645.0) TCP-1/cpn60 chaperonin family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032392 DNA geometric change IEP Predicted GO
BP GO:0032508 DNA duplex unwinding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 30 517
No external refs found!