Brara.B00939.1

Description : cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase acting on CH-NH group of donor

Gene families : OG_42_0000398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B00939.1
Cluster	HCAA Clusters: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
Brara.J01508.1	No alias	cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase...	0.04	Orthogroups_2024-Update
GRMZM2G146644	No alias	cytokinin oxidase 5	0.03	Orthogroups_2024-Update
Glyma.04G028900	No alias	cytokinin oxidase 5	0.04	Orthogroups_2024-Update
Glyma.09G063900	No alias	cytokinin oxidase 3	0.07	Orthogroups_2024-Update
Glyma.11G149100	No alias	cytokinin oxidase/dehydrogenase 6	0.05	Orthogroups_2024-Update
HORVU1Hr1G057860.6	No alias	cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase...	0.03	Orthogroups_2024-Update
HORVU2Hr1G090150.3	No alias	cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase...	0.02	Orthogroups_2024-Update
MA_31778g0010	No alias	(at5g21482 : 507.0) This gene used to be called AtCKX5....	0.07	Orthogroups_2024-Update
PSME_00043371-RA	No alias	(at5g21482 : 461.0) This gene used to be called AtCKX5....	0.02	Orthogroups_2024-Update
Pp1s403_31V6	No alias	cytokinin oxidase	0.03	Orthogroups_2024-Update
Seita.5G447700.1	No alias	EC_1.5 oxidoreductase acting on CH-NH group of donor &...	0.04	Orthogroups_2024-Update
Seita.6G174400.1	No alias	cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase...	0.04	Orthogroups_2024-Update
Sobic.004G094000.1	No alias	cytokinin dehydrogenase *(CKX) & EC_1.5 oxidoreductase...	0.03	Orthogroups_2024-Update
Solyc12g008900	No alias	cytokinin oxidase6	0.03	Orthogroups_2024-Update
Sopen01g035040	No alias	Cytokinin dehydrogenase 1, FAD and cytokinin binding	0.02	Orthogroups_2024-Update
Sopen04g034410	No alias	Cytokinin dehydrogenase 1, FAD and cytokinin binding	0.03	Orthogroups_2024-Update
Sopen10g030480	No alias	Cytokinin dehydrogenase 1, FAD and cytokinin binding	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009690	cytokinin metabolic process	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	None	Extended
MF	GO:0019139	cytokinin dehydrogenase activity	IEA	16Dec
BP	GO:0034754	cellular hormone metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	16Dec
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0004556	alpha-amylase activity	IEP	Predicted GO
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
BP	GO:0006417	regulation of translation	IEP	Predicted GO
BP	GO:0006448	regulation of translational elongation	IEP	Predicted GO
BP	GO:0006449	regulation of translational termination	IEP	Predicted GO
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Predicted GO
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0009893	positive regulation of metabolic process	IEP	Predicted GO
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Predicted GO
BP	GO:0010628	positive regulation of gene expression	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predicted GO
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0043244	regulation of protein complex disassembly	IEP	Predicted GO
BP	GO:0045727	positive regulation of translation	IEP	Predicted GO
BP	GO:0045901	positive regulation of translational elongation	IEP	Predicted GO
BP	GO:0045905	positive regulation of translational termination	IEP	Predicted GO
BP	GO:0048522	positive regulation of cellular process	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051130	positive regulation of cellular component organization	IEP	Predicted GO
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	59	201
IPR015345	Cytokinin_DH_FAD/cytokin-bd	233	513

External Links

No external refs found!

Brara.B00939.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation