Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.B00951.1 | |
Cluster | HCAA Clusters: Cluster_214 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
34785 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
99677 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
At1g25360 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.04 | Orthogroups_2024-Update | |
Bradi2g58450 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g32220 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Cre06.g298300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Orthogroups_2024-Update | |
Glyma.02G160400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G029200.4 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G124480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G115530.39 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G030840.1 | No alias | RNA editing factor *(MEF29) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G114390.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
LOC_Os11g01836 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_474261g0010 | No alias | (at3g12770 : 471.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
MA_767209g0010 | No alias | (at3g49170 : 650.0) embryo defective 2261 (EMB2261);... | 0.03 | Orthogroups_2024-Update | |
MA_79624g0010 | No alias | (at3g25970 : 531.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00002137-RA | No alias | (at2g22070 : 559.0) pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00020124-RA | No alias | (at5g09950 : 677.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
PSME_00039504-RA | No alias | (at4g13650 : 612.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00042901-RA | No alias | (at4g33170 : 526.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00046347-RA | No alias | (at2g13600 : 438.0) Pentatricopeptide repeat (PPR)... | 0.05 | Orthogroups_2024-Update | |
PSME_00050906-RA | No alias | (at4g33170 : 629.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
Seita.1G215700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003993 | acid phosphatase activity | IEP | Predicted GO |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 511 | 557 |
IPR002885 | Pentatricopeptide_repeat | 407 | 455 |
IPR002885 | Pentatricopeptide_repeat | 306 | 348 |
IPR002885 | Pentatricopeptide_repeat | 109 | 157 |
IPR002885 | Pentatricopeptide_repeat | 280 | 305 |
IPR002885 | Pentatricopeptide_repeat | 212 | 232 |
IPR002885 | Pentatricopeptide_repeat | 184 | 208 |
IPR002885 | Pentatricopeptide_repeat | 484 | 506 |
IPR002885 | Pentatricopeptide_repeat | 585 | 609 |
IPR032867 | DYW_dom | 721 | 813 |
No external refs found! |