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  5. Brara.B00956.1

Brara.B00956.1


Description : transcriptional co-regulator *(OFP)


Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00956.1
Cluster HCAA Clusters: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
At5g58360 No alias Transcription repressor OFP3... 0.03 Orthogroups_2024-Update
Brara.C02718.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
Brara.J01483.1 No alias transcriptional co-regulator *(OFP) 0.05 Orthogroups_2024-Update
GRMZM2G013271 No alias ovate family protein 6 0.03 Orthogroups_2024-Update
GRMZM2G053985 No alias ovate family protein 8 0.04 Orthogroups_2024-Update
GRMZM2G164428 No alias Ovate family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G076490.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
MA_923042g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00042805-RA No alias (at5g19650 : 85.9) ovate family protein 8 (OFP8);... 0.02 Orthogroups_2024-Update
Potri.004G062132 No alias ovate family protein 5 0.03 Orthogroups_2024-Update
Seita.3G130900.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update
Sobic.005G042800.1 No alias transcriptional co-regulator *(OFP) 0.04 Orthogroups_2024-Update
Sobic.006G187600.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
Sopen10g032560 No alias Transcriptional repressor, ovate 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006458 Ovate_C 64 119
No external refs found!