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  5. Brara.B00960.1

Brara.B00960.1


Description : NAC-type transcription factor


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00960.1
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
At3g15170 No alias CUC1 [Source:UniProtKB/TrEMBL;Acc:A0A178V703] 0.03 Orthogroups_2024-Update
At4g10350 No alias Protein BEARSKIN2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV87] 0.03 Orthogroups_2024-Update
Bradi1g17440 No alias Arabidopsis NAC domain containing protein 87 0.04 Orthogroups_2024-Update
Bradi3g33957 No alias NAC domain containing protein 71 0.03 Orthogroups_2024-Update
Brara.A00921.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C00813.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.08G041500 No alias NAC domain containing protein 58 0.03 Orthogroups_2024-Update
LOC_Os07g48550 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g11910.1 No alias transcription factor (NAC) 0.03 Orthogroups_2024-Update
PSME_00001380-RA No alias (at5g53950 : 248.0) Transcriptional activator of the NAC... 0.03 Orthogroups_2024-Update
Potri.012G001400 No alias NAC domain containing protein 100 0.03 Orthogroups_2024-Update
Potri.013G054200 No alias Arabidopsis NAC domain containing protein 87 0.03 Orthogroups_2024-Update
Potri.013G092400 No alias NAC domain containing protein 70 0.03 Orthogroups_2024-Update
Pp1s288_4V6 No alias no apical meristem 0.02 Orthogroups_2024-Update
Pp1s44_300V6 No alias nac domain ipr003441 0.03 Orthogroups_2024-Update
Pp1s46_208V6 No alias no apical meristem 0.03 Orthogroups_2024-Update
Sobic.004G112200.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G302400.3 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g115850 No alias NAC domain-containing protein 0.03 Orthogroups_2024-Update
Solyc08g006020 No alias NAC domain protein, (AHRD V3.3 *-* A0A061F8R9_THECC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 23 146
No external refs found!