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  5. Brara.B00999.1

Brara.B00999.1


Description : A1-class (Pepsin) protease


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00999.1
Cluster HCAA Clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Brara.E00825.1 No alias A1-class (Pepsin) protease 0.03 Orthogroups_2024-Update
GRMZM2G042008 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Glyma.12G083600 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
Glyma.18G283100 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
LOC_Os01g56930 No alias eukaryotic aspartyl protease domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00027430-RA No alias (at2g03200 : 374.0) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
PSME_00053525-RA No alias (at2g03200 : 289.0) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
Sobic.001G391000.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Sobic.002G243000.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.03 Orthogroups_2024-Update
Sobic.002G325800.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Solyc05g053900 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen03g038520 No alias Xylanase inhibitor C-terminal 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Predicted GO
CC GO:0005778 peroxisomal membrane IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031903 microbody membrane IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR032861 TAXi_N 80 265
IPR032799 TAXi_C 283 435
No external refs found!