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  5. Brara.B01051.1

Brara.B01051.1


Description : lignin laccase & EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01051.1
Cluster HCAA Clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
A4A49_05486 No alias laccase-17 0.04 Orthogroups_2024-Update
A4A49_13303 No alias laccase-7 0.04 Orthogroups_2024-Update
A4A49_15209 No alias laccase-4 0.05 Orthogroups_2024-Update
A4A49_20277 No alias laccase-11 0.05 Orthogroups_2024-Update
A4A49_34983 No alias laccase-4 0.03 Orthogroups_2024-Update
A4A49_60125 No alias laccase-17 0.03 Orthogroups_2024-Update
A4A49_64623 No alias laccase-5 0.03 Orthogroups_2024-Update
At2g30210 No alias Laccase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56YT0] 0.04 Orthogroups_2024-Update
At5g01190 No alias Laccase-10 [Source:UniProtKB/Swiss-Prot;Acc:Q6ID18] 0.04 Orthogroups_2024-Update
At5g03260 No alias Laccase-11 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZA1] 0.03 Orthogroups_2024-Update
Bradi1g66720 No alias laccase 17 0.02 Orthogroups_2024-Update
Bradi2g54680 No alias laccase 17 0.03 Orthogroups_2024-Update
Bradi2g54690 No alias laccase 17 0.06 Orthogroups_2024-Update
Brara.H02436.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
MA_57140g0020 No alias (at5g05390 : 788.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00003270-RA No alias (at5g60020 : 723.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00031560-RA No alias (at5g05390 : 678.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00043959-RA No alias (at5g03260 : 782.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.001G054600 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.001G248700 No alias Laccase/Diphenol oxidase family protein 0.04 Orthogroups_2024-Update
Potri.005G200700 No alias laccase 14 0.03 Orthogroups_2024-Update
Potri.007G023300 No alias laccase 11 0.03 Orthogroups_2024-Update
Potri.008G073700 No alias laccase 5 0.03 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.03 Orthogroups_2024-Update
Seita.9G453900.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Sobic.003G352700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Solyc10g085090 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 157 308
IPR011707 Cu-oxidase_3 31 144
IPR011706 Cu-oxidase_2 423 542
No external refs found!