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  5. Brara.B01101.1

Brara.B01101.1


Description : actin filament protein


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01101.1
Cluster HCAA Clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
A4A49_65510 No alias actin-71 0.03 Orthogroups_2024-Update
At2g42100 No alias Putative actin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC2] 0.03 Orthogroups_2024-Update
GRMZM2G006765 No alias actin 7 0.02 Orthogroups_2024-Update
LOC_Os10g36650 No alias actin, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00020741-RA No alias (p17299|act3_orysa : 570.0) Actin-3 - Oryza sativa... 0.03 Orthogroups_2024-Update
Sopen04g005680 No alias Actin 0.04 Orthogroups_2024-Update
Sopen11g025710 No alias Actin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!