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Description : auxin transporter *(PIN) & auxin efflux transporter *(PIN)
Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.B01244.1 | |
| Cluster | HCAA Clusters: Cluster_394 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 102666 | No alias | Auxin efflux carrier family protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_02382 | No alias | auxin efflux carrier component 3 | 0.03 | Orthogroups_2024-Update | |
| A4A49_06506 | No alias | auxin efflux carrier component 3 | 0.03 | Orthogroups_2024-Update | |
| At5g57090 | No alias | Auxin efflux carrier component 2... | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G040911 | No alias | Auxin efflux carrier family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G240500 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g50960 | No alias | auxin efflux carrier component, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g41720 | No alias | auxin efflux carrier component, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Mp3g21660.1 | No alias | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.02 | Orthogroups_2024-Update | |
| PSME_00016874-RA | No alias | (at1g70940 : 775.0) A regulator of auxin efflux and... | 0.02 | Orthogroups_2024-Update | |
| PSME_00020548-RA | No alias | (at5g57090 : 686.0) Encodes an auxin efflux carrier that... | 0.04 | Orthogroups_2024-Update | |
| PSME_00044024-RA | No alias | (at1g70940 : 589.0) A regulator of auxin efflux and... | 0.03 | Orthogroups_2024-Update | |
| Potri.002G072200 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.008G129400 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.015G038700 | No alias | Auxin efflux carrier family protein | 0.05 | Orthogroups_2024-Update | |
| Potri.018G139400 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| Seita.2G264800.1 | No alias | auxin efflux transporter *(PIN) & auxin transporter *(PIN) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G241500.1 | No alias | auxin efflux transporter *(PIN) & auxin transporter *(PIN) | 0.03 | Orthogroups_2024-Update | |
| Seita.5G295300.1 | No alias | auxin efflux transporter *(PIN) & auxin transporter *(PIN) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | 16Dec |
| BP | GO:0055085 | transmembrane transport | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Predicted GO |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0030570 | pectate lyase activity | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004776 | Mem_trans | 10 | 644 |
| No external refs found! |