1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g78600

At1g78600


Description : Light-regulated zinc finger protein 1 [Source:UniProtKB/TrEMBL;Acc:F4IBS4]


Gene families : OG_42_0002427 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g78600
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Bradi2g32900 No alias light-regulated zinc finger protein 1 0.05 Orthogroups_2024-Update
Brara.B02332.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Brara.G03597.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Glyma.09G099000 No alias light-regulated zinc finger protein 1 0.06 Orthogroups_2024-Update
HORVU6Hr1G028150.2 No alias BBX class-IV transcription factor 0.06 Orthogroups_2024-Update
Kfl00001_0850 kfl00001_0850_v1.1 (at1g78600 : 162.0) light-regulated zinc finger protein... 0.02 Orthogroups_2024-Update
Potri.001G384000 No alias light-regulated zinc finger protein 1 0.03 Orthogroups_2024-Update
Potri.011G105400 No alias light-regulated zinc finger protein 1 0.03 Orthogroups_2024-Update
Seita.5G143400.1 No alias BBX class-IV transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G026700.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Solyc07g062160 No alias Zinc finger, B-box (AHRD V3.3 *** A0A103Y421_CYNCS) 0.03 Orthogroups_2024-Update
Solyc12g005420 No alias Zinc finger, B-box (AHRD V3.3 *** A0A103Y421_CYNCS) 0.06 Orthogroups_2024-Update
Sopen07g030440 No alias B-box zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 47
IPR000315 Znf_B-box 55 89
No external refs found!