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  5. Brara.B01298.1

Brara.B01298.1


Description : oligopeptide transporter *(OPT)


Gene families : OG_42_0000467 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01298.1
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
At5g55930 No alias Oligopeptide transporter 1... 0.03 Orthogroups_2024-Update
Glyma.06G131800 No alias oligopeptide transporter 1 0.03 Orthogroups_2024-Update
Glyma.14G012400 No alias oligopeptide transporter 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G009770.2 No alias oligopeptide transporter *(OPT) 0.04 Orthogroups_2024-Update
MA_132413g0010 No alias (at4g16370 : 1173.0) Encodes an oligopeptide transporter... 0.03 Orthogroups_2024-Update
PSME_00026391-RA No alias (at5g64410 : 1031.0) oligopeptide transporter;... 0.03 Orthogroups_2024-Update
Potri.005G150400 No alias oligopeptide transporter 4 0.02 Orthogroups_2024-Update
Potri.006G006000 No alias oligopeptide transporter 0.03 Orthogroups_2024-Update
Sobic.004G273500.1 No alias oligopeptide transporter *(OPT) 0.02 Orthogroups_2024-Update
Solyc08g082990 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9RYS3_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 52 715
No external refs found!