Description : pectate lyase & EC_4.2 carbon-oxygen lyase
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.B01305.1 | |
Cluster | HCAA Clusters: Cluster_275 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
81909 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
At1g30350 | No alias | Probable pectate lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8G4] | 0.05 | Orthogroups_2024-Update | |
Brara.C00647.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
Glyma.06G174700 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G296900 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os06g38520 | No alias | pectate lyase family protein, expressed | 0.03 | Orthogroups_2024-Update | |
MA_10428603g0020 | No alias | (at1g67750 : 571.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00023843-RA | No alias | (at4g13710 : 610.0) Pectin lyase-like superfamily... | 0.03 | Orthogroups_2024-Update | |
PSME_00041064-RA | No alias | (at1g67750 : 595.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.006G122000 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.008G032700 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.011G008100 | No alias | root hair specific 14 | 0.05 | Orthogroups_2024-Update | |
Pp1s1_550V6 | No alias | Pectate lyase precursor (ZePel) [Zinnia elegans] | 0.02 | Orthogroups_2024-Update | |
Sopen02g025600 | No alias | Pectate lyase | 0.04 | Orthogroups_2024-Update | |
Sopen03g030810 | No alias | Pectate lyase | 0.03 | Orthogroups_2024-Update | |
Sopen06g028130 | No alias | Pectate lyase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | Predicted GO |
BP | GO:0006897 | endocytosis | IEP | Predicted GO |
MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | Predicted GO |
MF | GO:0008897 | holo-[acyl-carrier-protein] synthase activity | IEP | Predicted GO |
BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
BP | GO:0034311 | diol metabolic process | IEP | Predicted GO |
BP | GO:0034312 | diol biosynthetic process | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | Predicted GO |
BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
BP | GO:0098657 | import into cell | IEP | Predicted GO |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 128 | 303 |
No external refs found! |