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  5. Brara.B01373.1

Brara.B01373.1


Description : indole-3-acetic acid-amido synthetase *(GH3)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01373.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
115497 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
125443 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
A4A49_27021 No alias putative indole-3-acetic acid-amido synthetase gh3.1 0.03 Orthogroups_2024-Update
A4A49_29559 No alias indole-3-acetic acid-amido synthetase gh3.6 0.03 Orthogroups_2024-Update
A4A49_37324 No alias indole-3-acetic acid-amido synthetase gh3.6 0.04 Orthogroups_2024-Update
A4A49_40489 No alias putative indole-3-acetic acid-amido synthetase gh3.9 0.03 Orthogroups_2024-Update
At1g48670 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
At5g13320 No alias Auxin-responsive GH3 family protein [Source:TAIR;Acc:AT5G13320] 0.05 Orthogroups_2024-Update
At5g13350 No alias Auxin-responsive GH3 family protein... 0.04 Orthogroups_2024-Update
At5g13380 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
Brara.C02329.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.03 Orthogroups_2024-Update
Brara.E01559.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F00408.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G00820.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Brara.I00224.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.03 Orthogroups_2024-Update
Brara.I05218.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K00646.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G053338 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
GRMZM2G061005 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
GRMZM2G410567 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Glyma.02G154600 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.04 Orthogroups_2024-Update
Glyma.05G101300 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.12G108900 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.13G284600 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.17G165300 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G092890.5 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.05 Orthogroups_2024-Update
LOC_Os01g55940 No alias OsGH3.2 - Probable indole-3-acetic acid-amido... 0.05 Orthogroups_2024-Update
LOC_Os05g42150 No alias OsGH3.4 - Probable indole-3-acetic acid-amido... 0.02 Orthogroups_2024-Update
MA_66253g0010 No alias (at5g54510 : 182.0) Encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
PSME_00030829-RA No alias (at5g54510 : 861.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
PSME_00043353-RA No alias (at5g54510 : 867.0) Encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
PSME_00049249-RA No alias (at5g54510 : 889.0) Encodes an IAA-amido synthase that... 0.01 Orthogroups_2024-Update
Potri.002G206400 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Potri.003G161300 No alias Auxin-responsive GH3 family protein 0.05 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Potri.009G092900 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Potri.013G151100 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Seita.2G375300.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Sobic.001G331200.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Sobic.003G306500.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Sobic.005G108300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G134200.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Solyc10g009610 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) 0.05 Orthogroups_2024-Update
Solyc12g005310 No alias Auxin-responsive GH3 family protein (AHRD V3.3 *** AT5G54510.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 28 578
No external refs found!