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  5. Brara.B01378.1

Brara.B01378.1


Description : BBX class-V transcription factor


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01378.1
Cluster HCAA Clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
A4A49_12129 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_19758 No alias b-box domain protein 30 0.06 Orthogroups_2024-Update
At3g21890 No alias BBX31 [Source:UniProtKB/TrEMBL;Acc:A0A178VEW7] 0.03 Orthogroups_2024-Update
At5g54470 No alias BBX29 [Source:UniProtKB/TrEMBL;Acc:A0A178UJV0] 0.08 Orthogroups_2024-Update
Brara.C03818.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Brara.K00095.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Glyma.06G255300 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.08G221600 No alias B-box 32 0.03 Orthogroups_2024-Update
Glyma.12G103800 No alias B-box type zinc finger family protein 0.05 Orthogroups_2024-Update
Glyma.12G196200 No alias B-box type zinc finger family protein 0.02 Orthogroups_2024-Update
Kfl00104_0060 kfl00104_0060_v1.1 (at4g27310 : 80.5) B-box type zinc finger family... 0.01 Orthogroups_2024-Update
MA_10430891g0010 No alias (at4g27310 : 113.0) B-box type zinc finger family... 0.05 Orthogroups_2024-Update
MA_10432136g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_61108g0010 No alias (at3g21150 : 86.7) Encodes a protein with a B-box domain... 0.04 Orthogroups_2024-Update
Mp3g20050.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.001G414700 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.011G125400 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.013G150500 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.017G039400 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Pp1s364_14V6 No alias F24B18.9; CONSTANS B-box zinc finger family protein... 0.04 Orthogroups_2024-Update
Pp1s38_346V6 No alias zinc finger (b-box type) family protein 0.04 Orthogroups_2024-Update
Pp1s97_104V6 No alias zinc finger (b-box type) family protein 0.03 Orthogroups_2024-Update
Seita.1G067400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G043200.1 No alias BBX class-V transcription factor 0.03 Orthogroups_2024-Update
Solyc02g079430 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y479_CYNCS) 0.03 Orthogroups_2024-Update
Solyc07g053140 No alias Zinc finger, B-box (AHRD V3.3 *** A0A103Y7X2_CYNCS) 0.03 Orthogroups_2024-Update
Solyc10g006750 No alias ABC-2 and Plant PDR ABC-type transporter family protein... 0.04 Orthogroups_2024-Update
Solyc12g005660 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS) 0.03 Orthogroups_2024-Update
Sopen06g022740 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen07g026690 No alias B-box zinc finger 0.02 Orthogroups_2024-Update
Sopen12g001590 No alias B-box zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 2 43
No external refs found!