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At1g78750


Description : F-box/FBD/LRR-repeat protein At1g78750 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV93]


Gene families : OG_42_0000773 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g78750
Cluster HCCA clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
At1g78840 No alias Putative F-box/FBD/LRR-repeat protein At1g78840... 0.02 Orthogroups_2024-Update
At4g13985 No alias FBD-associated F-box protein At4g13985... 0.01 Orthogroups_2024-Update
At5g18780 No alias FBD-associated F-box protein At5g18780... 0.03 Orthogroups_2024-Update
At5g27750 No alias FBD-associated F-box protein At5g27750... 0.05 Orthogroups_2024-Update
At5g44980 No alias F-box/FBD/LRR-repeat protein At5g44980... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 19 56
IPR013101 Leu-rich_rpt_2 175 200
IPR006566 FBD 383 426
No external refs found!