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  5. Brara.B01625.1

Brara.B01625.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01625.1
Cluster HCAA Clusters: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
A4A49_35938 No alias putative e3 ubiquitin-protein ligase ari2 0.03 Orthogroups_2024-Update
Bradi4g37780 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
LOC_Os04g41470 No alias expressed protein 0.03 Orthogroups_2024-Update
Potri.002G131300 No alias IBR domain-containing protein 0.05 Orthogroups_2024-Update
Solyc04g079780 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G16090.1) 0.03 Orthogroups_2024-Update
Solyc06g073340 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G05890.1) 0.02 Orthogroups_2024-Update
Sopen12g030900 No alias IBR domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 277 325
IPR002867 IBR_dom 198 260
No external refs found!