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  5. Brara.B01641.1

Brara.B01641.1


Description : PHD finger transcription factor & meiotic recombination regulating transcription factor *(MMD1/DUET)


Gene families : OG_42_0001013 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01641.1
Cluster HCAA Clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Kfl00103_0090 kfl00103_0090_v1.... (at1g66170 : 338.0) encodes a PHD-domain containing... 0.02 Orthogroups_2024-Update
Potri.008G137200 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G140300 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 617 662
No external refs found!