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  5. Brara.B01673.1

Brara.B01673.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01673.1
Cluster HCAA Clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
At2g30130 No alias PCK1 [Source:UniProtKB/TrEMBL;Acc:A0A178VRK1] 0.04 Orthogroups_2024-Update
Bradi4g28883 No alias LOB domain-containing protein 22 0.04 Orthogroups_2024-Update
Glyma.09G021600 No alias LOB domain-containing protein 4 0.04 Orthogroups_2024-Update
Glyma.13G191000 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.04 Orthogroups_2024-Update
LOC_Os01g60960 No alias DUF260 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_16891g0010 No alias (at5g63090 : 175.0) Involved in lateral organ... 0.03 Orthogroups_2024-Update
Mp5g10960.1 No alias transcription factor (AS2/LOB) 0.02 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
PSME_00028054-RA No alias (at1g07900 : 124.0) LOB domain-containing protein 1... 0.05 Orthogroups_2024-Update
PSME_00044524-RA No alias (at1g31320 : 197.0) LOB domain-containing protein 4... 0.02 Orthogroups_2024-Update
PSME_00045603-RA No alias (at2g40470 : 164.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
Pp1s66_56V6 No alias T19E23.11; LOB domain protein 4 / lateral organ... 0.04 Orthogroups_2024-Update
Solyc06g075330 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen11g004610 No alias Protein of unknown function DUF260 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 9 106
No external refs found!