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  5. Brara.B01678.1

Brara.B01678.1


Description : Unknown function


Gene families : OG_42_0000030 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01678.1
Cluster HCAA Clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Bradi5g24760 No alias S-domain-2 5 0.03 Orthogroups_2024-Update
Glyma.13G033500 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os06g13320 No alias protein kinase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436344g0010 No alias (at5g24080 : 91.3) Protein kinase superfamily protein;... 0.04 Orthogroups_2024-Update
Seita.5G092500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Solyc02g081500 No alias Receptor kinase LRK10 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030247 polysaccharide binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003972 RNA ligase (ATP) activity IEP Predicted GO
MF GO:0005484 SNAP receptor activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008452 RNA ligase activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
InterPro domains Description Start Stop
IPR025287 WAK_GUB 67 130
No external refs found!