1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.B01860.1

Brara.B01860.1


Description : Qb-type VTI-group component of SNARE membrane fusion complex


Gene families : OG_42_0001748 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001748_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01860.1
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g37980 No alias vesicle transport v-SNARE protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.5G289300.1 No alias Qb-type VTI-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 91
No external refs found!