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  5. Brara.B01898.1

Brara.B01898.1


Description : regulatory protein *(CYCD) of cell cycle


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01898.1
Cluster HCAA Clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G046200 No alias cyclin d5;1 0.03 Orthogroups_2024-Update
Glyma.08G291000 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
HORVU6Hr1G077500.1 No alias regulatory protein *(CYCD) of cell cycle 0.04 Orthogroups_2024-Update
Potri.001G292300 No alias CYCLIN D1;1 0.05 Orthogroups_2024-Update
Potri.004G032100 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Potri.008G146600 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Solyc01g107730 No alias D-type cyclin-2 0.02 Orthogroups_2024-Update
Solyc07g054950 No alias cyclinD6_1 0.05 Orthogroups_2024-Update
Sopen01g010480 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 36 163
IPR004367 Cyclin_C-dom 166 277
No external refs found!