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  5. Brara.B01950.1

Brara.B01950.1


Description : transcription factor *(CRF) & subgroup ERF-VI transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B01950.1
Cluster HCAA Clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
A4A49_06467 No alias ethylene-responsive transcription factor crf4 0.04 Orthogroups_2024-Update
At1g22190 No alias Ethylene-responsive transcription factor RAP2-13... 0.04 Orthogroups_2024-Update
At2g35700 No alias ERF38 [Source:UniProtKB/TrEMBL;Acc:A0A178VWJ3] 0.03 Orthogroups_2024-Update
At3g14230 No alias Ethylene-responsive transcription factor RAP2-2... 0.03 Orthogroups_2024-Update
At5g51190 No alias Ethylene-responsive transcription factor ERF105... 0.03 Orthogroups_2024-Update
Bradi1g04110 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.02 Orthogroups_2024-Update
Brara.A03436.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.01 Orthogroups_2024-Update
Brara.E02172.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.F00298.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.G00520.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.G03555.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G110333 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Glyma.04G062900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G035000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G194800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G119100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G123100 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.14G020100 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Glyma.14G205600 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.17G145400 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G099670.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os03g08470 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g41760 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g11460 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g11480 No alias AP2 domain containing protein, expressed 0.05 Orthogroups_2024-Update
Mp5g12480.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Orthogroups_2024-Update
PSME_00050761-RA No alias (at1g15360 : 129.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
Potri.001G110700 No alias C-repeat-binding factor 4 0.03 Orthogroups_2024-Update
Potri.005G140900 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Potri.007G046500 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Potri.007G138100 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Potri.011G057000 No alias erf domain protein 9 0.04 Orthogroups_2024-Update
Potri.018G038100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s126_33V6 No alias LOC397994; middle molecular weight neurofilament protein... 0.03 Orthogroups_2024-Update
Pp1s14_196V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s1_34V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s276_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s37_293V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Pp1s41_212V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s487_24V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.7G232100.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.9G516500.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G324500.1 No alias subgroup ERF-VIII transcription factor 0.01 Orthogroups_2024-Update
Sobic.004G297100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G052600.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Solyc04g078640 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc05g052050 No alias DNA-binding protein Pti4 0.02 Orthogroups_2024-Update
Solyc06g082590 No alias DNA-binding protein Pti6 0.02 Orthogroups_2024-Update
Sopen00g003270 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen05g030600 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0032422 purine-rich negative regulatory element binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 85 138
No external refs found!