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  5. Brara.B02127.1

Brara.B02127.1


Description : RKD-type transcription factor & germ cell differentiation factor *(RKD)


Gene families : OG_42_0000310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02127.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G085500 No alias RWP-RK domain-containing protein 0.03 Orthogroups_2024-Update
Kfl00063_0010 kfl00063_0010_v1.1 (at5g66990 : 94.0) RWP-RK domain-containing protein;... 0.01 Orthogroups_2024-Update
Kfl00064_0120 kfl00064_0120_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
MA_10430030g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00045984-RA No alias (at4g35590 : 157.0) RWP-RK domain-containing protein;... 0.02 Orthogroups_2024-Update
Potri.006G223100 No alias Function unknown 0.03 Orthogroups_2024-Update
Pp1s9_112V6 No alias hypothetical protein [Dictyostelium discoideum] 0.02 Orthogroups_2024-Update
Sobic.003G186200.1 No alias RKD-type transcription factor & germ cell... 0.03 Orthogroups_2024-Update
Sobic.004G238400.1 No alias RKD-type transcription factor & germ cell... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 120 167
No external refs found!