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  5. Brara.B02272.1

Brara.B02272.1


Description : auxin efflux transporter *(PILS) & auxin transporter *(PILS)


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02272.1
Cluster HCAA Clusters: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
A4A49_11916 No alias protein pin-likes 1 0.03 Orthogroups_2024-Update
At2g17500 No alias Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8] 0.04 Orthogroups_2024-Update
Brara.G03026.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Brara.H00235.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.04 Orthogroups_2024-Update
Glyma.01G157700 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.07G113100 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
Glyma.09G196900 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
Glyma.09G271100 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
LOC_Os05g40330 No alias auxin efflux carrier component, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g09190 No alias auxin efflux carrier component, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00012379-RA No alias (at5g65980 : 403.0) Auxin efflux carrier family protein;... 0.03 Orthogroups_2024-Update
Potri.002G003500 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Potri.004G093200 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Pp1s420_20V6 No alias auxin efflux carrier auxin transport protein 0.02 Orthogroups_2024-Update
Seita.2G255400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G255500.1 No alias auxin transporter *(PILS) & auxin efflux transporter *(PILS) 0.03 Orthogroups_2024-Update
Sobic.001G520000.2 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.04 Orthogroups_2024-Update
Solyc04g082830 No alias Auxin efflux carrier family protein, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen12g031650 No alias Membrane transport protein 0.07 Orthogroups_2024-Update
evm.model.tig00020685.36 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00021374.15 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predicted GO
MF GO:0061657 UFM1 conjugating enzyme activity IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 11 378
No external refs found!