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  5. Brara.B02276.1

Brara.B02276.1


Description : calcium sensor *(CML)


Gene families : OG_42_0001705 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001705_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02276.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_09949 No alias calcium-binding protein cml37 0.04 Orthogroups_2024-Update
A4A49_09950 No alias calcium-binding protein cml37 0.04 Orthogroups_2024-Update
Potri.005G259900 No alias calmodulin-like 38 0.03 Orthogroups_2024-Update
Potri.T115000 No alias calmodulin-like 38 0.02 Orthogroups_2024-Update
Seita.9G333800.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sobic.003G430400.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Solyc11g071740 No alias Calmodulin-like protein (AHRD V1 ***- Q0VJ70_DATME) 0.03 Orthogroups_2024-Update
Solyc11g071760 No alias regulator of gene silencing AY642285 0.04 Orthogroups_2024-Update
Sopen02g038650 No alias EF hand 0.02 Orthogroups_2024-Update
Sopen11g029410 No alias EF-hand domain pair 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 121 168
IPR002048 EF_hand_dom 31 92
No external refs found!