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Description : Qc-type SYP5-group component of SNARE membrane fusion complex
Gene families : OG_42_0002663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002663_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.B02379.1 | |
| Cluster | HCAA Clusters: Cluster_139 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g16240 | No alias | SYP51 [Source:UniProtKB/TrEMBL;Acc:A0A178WJ29] | 0.04 | Orthogroups_2024-Update | |
| Bradi3g19690 | No alias | syntaxin of plants 52 | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G016680.2 | No alias | Qc-type SYP5-group component of SNARE membrane fusion complex | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| MF | GO:0000976 | transcription regulatory region sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding | IEP | Predicted GO |
| MF | GO:0001012 | RNA polymerase II regulatory region DNA binding | IEP | Predicted GO |
| MF | GO:0001067 | regulatory region nucleic acid binding | IEP | Predicted GO |
| BP | GO:0002376 | immune system process | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
| BP | GO:0006955 | immune response | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | Predicted GO |
| MF | GO:0044212 | transcription regulatory region DNA binding | IEP | Predicted GO |
| BP | GO:0045087 | innate immune response | IEP | Predicted GO |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000727 | T_SNARE_dom | 175 | 226 |
| No external refs found! |