Brara.B02398.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02398.1
Cluster HCAA Clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
At3g23130 No alias Uncharacterized protein At3g23130 (Fragment)... 0.07 Orthogroups_2024-Update
At3g58070 No alias GIS [Source:UniProtKB/TrEMBL;Acc:A0A178V7D1] 0.03 Orthogroups_2024-Update
At5g06650 No alias Zinc finger protein GIS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG05] 0.03 Orthogroups_2024-Update
Brara.B03462.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G082686 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Glyma.01G036600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G029100 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Glyma.03G160700 No alias zinc finger protein 11 0.04 Orthogroups_2024-Update
Glyma.08G356600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.12G059500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G216800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G162500 No alias zinc finger protein 11 0.04 Orthogroups_2024-Update
HORVU2Hr1G034650.6 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G083170.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G080870.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g53530 No alias ZOS2-17 - C2H2 zinc finger protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g05900 No alias ZOS7-02 - C2H2 zinc finger protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g36110 No alias ZOS8-06 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g27320 No alias ZOS9-13 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_121523g0010 No alias (at1g66140 : 110.0) Encodes a zinc finger protein... 0.02 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.03 Orthogroups_2024-Update
PSME_00004584-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.001G047500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G097900 No alias zinc finger protein 6 0.06 Orthogroups_2024-Update
Potri.008G121200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G102700 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
Potri.010G122400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G140700 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Pp1s14_187V6 No alias FCAALL.130; zinc finger (C2H2 type) family protein... 0.03 Orthogroups_2024-Update
Pp1s2_490V6 No alias transcriptional regulator 0.05 Orthogroups_2024-Update
Seita.2G035000.1 No alias C2H2 subclass ZFP transcription factor 0.05 Orthogroups_2024-Update
Seita.2G375500.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.3G391200.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.5G180100.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G173300.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc03g117070 No alias Zinc finger protein, putative (AHRD V3.3 *** B9SMU5_RICCO) 0.03 Orthogroups_2024-Update
Solyc05g009170 No alias Zinc finger family protein (AHRD V3.3 *** B9HWF8_POPTR) 0.06 Orthogroups_2024-Update
Solyc08g077000 No alias LOW QUALITY:Zinc finger, C2H2 (AHRD V3.3 *** A0A103XFH7_CYNCS) 0.03 Orthogroups_2024-Update
Sopen01g049680 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen03g011760 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!