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  5. Brara.B02400.1

Brara.B02400.1


Description : scaffold nucleoporin of nuclear pore complex


Gene families : OG_42_0001108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B02400.1
Cluster HCAA Clusters: Cluster_396

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G034780.2 No alias nucleoporin of nuclear pore complex *(NUP98) 0.01 Orthogroups_2024-Update
Sobic.006G126900.1 No alias nucleoporin of nuclear pore complex *(NUP98) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA 16Dec
BP GO:0006913 nucleocytoplasmic transport IEA 16Dec
MF GO:0017056 structural constituent of nuclear pore IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 27 164
IPR021967 Nup96 537 815
No external refs found!